BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H01LP1|AL426426
(785 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1011 1515 0.0
>3x_Contig1011
Length = 3580
Score = 1515 bits (760), Expect = 0.0
Identities = 777/786 (98%), Gaps = 1/786 (0%)
Strand = Plus / Plus
Query: 1 gatcatcgcaaatagaatctgttggtacattatagaagtcgtcaatatcgaatgagacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 gatcatcgcaaatagaatctgttggtacattatagaagtcgtcaatatcgaatgagacaa 1687
Query: 61 actctctttggaatgaatatggatgtagatcaagatcgahagtggtaagamactatcatt 120
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 1688 actctctttggaatgaatatggatgtagatcaagatcgaaagtggtaagaaactatcatt 1747
Query: 121 ataaggatttttcatacactgttgccaacaggtttgccatatatgccagamttctttctt 180
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 1748 ataaggatttttcatacactgttgccaacaggtttgccatatatgcaagaattctttctt 1807
Query: 181 cttctcgtgatcactgtccaaattctctaacaaattaacagataacaaggctaaaggtaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 cttctcgtgatcactgtccaaattctctaacaaattaacagataacaaggctaaaggtaa 1867
Query: 241 aggagacgtcttacaccaattgtcgaaggtagcttcattctgaatagcagctgtccattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1868 aggagacgtcttacaccaattgtcgaaggtagcttcattctgaatagcagctgtccattg 1927
Query: 301 aatagacaaagttcccgggaathacgagttacggtgaaggtaagagaacgctttactcaa 360
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1928 aatagacaaagttcccgggaataacgagttacggtgaaggtaagagaacgctttactcaa 1987
Query: 361 aagaacctctggmtcgtccaatatattgcggaaacgaccgatgaaaatagttttcaaaac 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1988 aagaacctctggatcgtccaatatattgcggaaacgaccgatgaaaatagttttcaaaac 2047
Query: 421 ttcagaatccaacgaaatcggcagagtgtgtttgttgaacacaagggatccattaccctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2048 ttcagaatccaacgaaatcggcagagtgtgtttgttgaacacaagggatccattaccctt 2107
Query: 481 gccctcatgagaatcagtacgattagccaacggagccattaacttttgtttgtttaaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 gccctcatgagaatcagtacgattagccaacggagccattaacttttgtttgtttaaatc 2167
Query: 541 cgggctcggattttggatagtcacatcatcaacgtcatcttcatcagaaggagtyatggg 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2168 cgggctcggattttggatagtcacatcatcaacgtcatcttcatcagaaggagtcatggg 2227
Query: 601 taatggtttgttgggattcgaagaggaaaccgcattatcttgtggggcaacaatgccaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2228 taatggtttgttgggattcgaagaggaaaccgcattatcttgtggggcaacaatgccaga 2287
Query: 661 agcatggtcatcttcgcagttatctatctcagatcgtaggacatgagctgttaatggtgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2288 agcatggtcatcttcgcagttatctatctcagatcgtaggacatgagctgttaatggtgt 2347
Query: 721 attgggggtgactttagtc-mtgaatccattggttgctgcgaactgttaggactacttcc 779
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 2348 attgggggtgactttagtcactgaatccattggttgctgcgaactgttaggactacttcc 2407
Query: 780 aggtat 785
||||||
Sbjct: 2408 aggtat 2413
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5501
Number of Sequences: 1807
Number of extensions: 5501
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 785
length of database: 10,358,551
effective HSP length: 16
effective length of query: 769
effective length of database: 10,329,639
effective search space: 7943492391
effective search space used: 7943492391
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)